Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890753.1_cds_XP_016445461.1_40419
CDS Infomation

[gene=LOC107770639] [db_xref=GeneID:107770639] [protein=putative pentatricopeptide repeat-containing protein At3g23330] [protein_id=XP_016445461.1] [location=59916..61367] [gbkey=CDS]
Sequence

ATGTGCACTAAATCCCATTCGCAGTATGAAACAGGACCAAACTTCTATTCCATCACTAAC
ATCTTTCACCATTTTTGCAGCTCAAAGAATCTGAGAGCCATTAAAGTATTTCATGCACAT
CTAATTAGAACAGGATTAATCTTCGTCTCCCCTAACTTTCAGTTCAAACTCATATCTACT
ACATGTACAACTACTTCACTTCCCAACAATAACAACCTTAAAACCTTAACCAACTTCTTC
AAATTCCCCAAACCCAAAAACCCTTTGCTCTTAAATTCAATTCTTTCCCATTTTTCCCAA
AATGGGTTTCATTTTCTTGCTCTTAAAACATTCTCTTATATGCATTTTAGTGGAATTGAC
ATTGATTCATACACCTTGTGTAGCTCCATTACAGCTTCATCTGCTGTTAAAAATGTAAAC
TTTGGGCAAATGGTTCATACCCTTGTGCATAAATCAGGTTGGATTTCTAGTGTTTATGTG
GGGTGTGCTTTAGTCGATGTGTATGCTAAGTCTTTGTGTATCAAGAATGCAGCTATGTTG
TTCGATGAAATTCCTGTGAAGAACACAGTGTGTGTGAACGCACTTTTTTCGGGCTATTCT
GAAGCTAAGATGTGGATGGAGGGACTGGCGTTGGCGAGGAAGATGCCATGGTTGAATCTA
TCTTGGGATAATTTCACTTTTTCAGCTGCTTTGCGTGCTTGCGTTGGGCTCTCTGTATTT
GAATTGGGTAAGCAAGTTCATGGATGTGTTATTCGAGAAGTTCATGACTTGGAATCTGAT
GTTTTTCTTCAAAGTTTGTTGATTGAAATGTATGGCAAAAGTGGGTCAGTGGAGAAGGCT
AGGCATGTATTCGACATGGTCGGCTTTAGATGTGGAGAAAGAAAGAAGGATGTTGTTCTT
TGGACATCAATGCTTGGTGTTTGCGGAAGAAATGGGAAATTTGAAGAAGTGATTAGTTTG
TTTAATGACATGGTGATGGAAGGAATCAAACCAGATGGTGTAGCATTATTGACTGTTCTC
TCTGCTTGTAGTCACACAGGCCACGTAAATCTTGGAATGGAGTACTTTGAATCAATGGCA
TCTAATTACAGTTTGGAACCCAGCCCCGAGCACTACGGTTGTGTTGTTGACTTACTGTGT
CGTGCAGGTGAGTTGGATAGAGCATGGAAACTAATCAACGAGTTATCTTACAAAGATAAT
GATAATTTCACTGTTACCTTGTGGGGAGCCTTGCTTAGTGCCTGCCATAACTTTGACAAT
GTCGAACTAGGTAAATTAGCTGCTCGAAGGGCATTGAATTTGGACCCTCAAAATGACGGG
GTTTATGTTCTGCTATCGAACTTGTATGGCAGGAATGGCATGTGGAAGGAAATTGAGATG
TTGAGGGAACATATAAAAGAGAAGGGATTAAAGAAAAACATAGGACATAGTTTGGTAGAT
ATCTGTAGATGA

Peptide Sequence

PEP ID

XP_016445461.1
PEP Infomation

PREDICTED: putative pentatricopeptide repeat-containing protein At3g23330 [Nicotiana tabacum]
Sequence

MCTKSHSQYETGPNFYSITNIFHHFCSSKNLRAIKVFHAHLIRTGLIFVSPNFQFKLIST
TCTTTSLPNNNNLKTLTNFFKFPKPKNPLLLNSILSHFSQNGFHFLALKTFSYMHFSGID
IDSYTLCSSITASSAVKNVNFGQMVHTLVHKSGWISSVYVGCALVDVYAKSLCIKNAAML
FDEIPVKNTVCVNALFSGYSEAKMWMEGLALARKMPWLNLSWDNFTFSAALRACVGLSVF
ELGKQVHGCVIREVHDLESDVFLQSLLIEMYGKSGSVEKARHVFDMVGFRCGERKKDVVL
WTSMLGVCGRNGKFEEVISLFNDMVMEGIKPDGVALLTVLSACSHTGHVNLGMEYFESMA
SNYSLEPSPEHYGCVVDLLCRAGELDRAWKLINELSYKDNDNFTVTLWGALLSACHNFDN
VELGKLAARRALNLDPQNDGVYVLLSNLYGRNGMWKEIEMLREHIKEKGLKKNIGHSLVD
ICR

Transcript Sequence

Gene sequence data has not been registered.